BDB -BiopanningDataSet Details

Biopanning Data

BiopanningDataSet ID: 3167

Peptides:

Sequences

ADGIVGW(3105)
LAAGAVW(3039)
SAGFAME(2944)
VSLCSSR(2925)
SVTDYVE(2855)
RMGIRAL(2659)
DDDGLDG(1931)
SAARVFM(1723)
QLYGARE(1716)
NRSREMG(1707)
IVPACRG(1646)
RLVYVPS(1335)
TGCSSIL(1166)
AFHSGLT(1106)
CSWTLER(996)
GGGVGLL(912)
WHAQVGF(852)
ERRMGSC(844)
SGVGATH(770)
RLRWWGR(738)

Sequences Features:

Motif:

Unique Sequence Number:

Experimental Method:

Phage display (common panning)

Sequencing Platform:

Illumina HiSeq 2000 and/or Genome Analyzer Iix

Sequencing Method:

Next-generation sequencing

Rounds of Panning:

Reference:

PMID: 22870226

Target Name:

Anti-gp120 monoclonal antibody GV4H3

Template Name:

Surface protein gp120, SU

Structure of Target-Template Complex:

Not determined.

Structure of Target-Peptide Complex:

Not determined.

Library Name:

pVIII fth1-dp-based X7 phage display library (X7)

Affinity Measurement Method:

Affinity Measurement Description:

Brief Description:

the captured phages were eluted and directly amplified by PCR.

BiopanningDataSet Comments:

The 20 top most frequent peptides for each capture are given.

Curator:

Lixu Jiang

Curation Date:

2017-05-09

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