Complex | |
AACDB_ID: | 7119 |
PDBID: | 5H32 |
Chains: | IM_C |
Organism: | Zika virus, Homo sapiens |
Method: | EM |
Resolution (Å): | 12.00 |
Reference: | 10.1038/ncomms13679 |
Antibody | |
Antibody: | C10 Fab |
Antibody mutation: | No |
INN (Clinical Trial): | |
Antigen | |
Antigen: | Zika virus envelope glycoprotein E |
Antigen mutation: | No |
Durg Target: |
Antibody
Heavy Chain: I
Mutation: NULL
>5H32_I|Chain D[auth G], F[auth I], H[auth K]|C10 IgG heavy chain variable region|Homo sapiens (9606) EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVS |
Light Chain: M
Mutation: NULL
>5H32_M|Chain E[auth H], G[auth L], I[auth M]|C10 IgG light chain variable region|Homo sapiens (9606) SALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVL |
Antigen
Chain: C
Mutation: NULL
>5H32_C|Chain A, B, C|structural protein E|Zika virus (64320) IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRS |
Interaction
1、Solvent accessible surface areas (SASA) were calculated (Naccess V2.1.1) for each residue in antibody and antigen, respectively. The residues with SASA loss in binding of more than 1Å2 were classified as interacting residues.
Interacting residues (ΔSASA based)
M: ASN30 SER92 ARG93 C: ALA69 SER70 ASP71 SER72 ASN103 GLY104 |
2、We defined interacting paratope-epitope residues by a distance cutoff of < 5Å . Two amino acids are considered as interacting residues if they have at least one atom within a distance of 5 Å from any atom.
Interacting residues (Atom distance based)
Within the threshold, the structure has no interacting amino acids and cannot be displayed. This may be due to the following reasons: