Though you may try directly to map a mimotope onto corresponding structure of native protein, you can also derive a consensus sequence from a set of mimotopes at first, and then map the consensus sequence or part of the consensus sequence back to corresponding structure of native protein. Here, we provide a simple web interface for fast alignments of mimotopes powered by ClustalW. After the mimotopes are aligned, you can get a consensus sequence through a simple statistic method or through JalView. You can also align your mimotopes more accurately using EBI ClustalW server. Besides, you can try to get a consensus sequence from unaligned mimotopes through EBI PRATT server. To get some test data, click here.