501 CGRTRVTSC(2) CGRTRDN(2) CRNPKKATC(2) CSTKRKPNC(2) CAREVTLLC(1) CSREVTLLC(1) CDTTIANCC(1) CDRILSPSC(1) CTPKKSGRC(1) CTTSSLTDC(1) CGSNSLTPC(1) CCKSLRPHC(1) CTKPKRNNC(1) 13 Phage display (common panning) 4 PMID:19121687 Anti-LPS monoclonal antibody 9D5 Lipopolysaccharide, LPS Not determined. Not determined. CX7C T7 phage display library 502 CGRTRVTSC(4) CAPRSSNRC(3) CAREVTLLC(2) CGRTRDN(1) CAPQ(1) CLLLAQTDC(1) SKKIPTC(1) CLGRISPPC(1) CASNSLTPC(1) 9 Phage display (common panning) 4 PMID:19121687 Anti-EPS monoclonal antibody 4B11 Exopolysaccharide, EPS Not determined. Not determined. CX7C T7 phage display library 503 NSEQLNFVMKVV(4) GYVGPRLGSGIG(1) TVVMGRVWQYEQ(1) GYVGPRLEVGDW(1) 4 Phage display (common panning) 4 PMID:19121687 Anti-EPS monoclonal antibody 4B11 Exopolysaccharide, EPS Not determined. Not determined. Ph.D.-12 phage display library (X12) 504 CLGRVLANC(3) CPYPRKGSC(2) CVPKKNRTC(2) CGRTRVTSC(2) CGRTRDN(1) CRFLRRTVC(1) CRGRTHPLC(1) CDTKKNHCC(1) CNICARQYC(1) CVRNSLTPC(1) CRGRTLHLC(1) CRGRTHPRC(1) CSYVGKGSC(1) 13 Phage display (common panning) 4 PMID:19121687 Monoclonal antibody BPA Not determined. Not determined. Not determined. CX7C T7 phage display library 505 CGRTRVTSC(2) CGRTRDN(2) CAREVTLLC(2) CGAESLTPC(2) CFTVARACC(2) CGPKRKATC(1) CSGLLVANC(1) CSKKNPGNC(1) CGSESLTPC(1) CCKSLRPHC(1) CAKTRTAKC(1) CRTKKSGTC(1) CKTRKSGSC(1) 13 Phage display (common panning) 4 PMID:19121687 Monoclonal antibody BPM Not determined. Not determined. Not determined. CX7C T7 phage display library 506 RNTRHPPPWSAE WPGSNLTPRTQT LIKTSPRSERYA SVSVGCKPVPRP SHLLKPQTRTRT QLSGTLERQWQR VLPPALEITPLT VIPLAIEFTPRP AQVTLPIRTPNA P-S-R-T-P-R-P-E-W-A-x-L 9 Phage display (common panning) 3 PMID:18242709 Anti-Pru p 3 polyclonal antibody IgE (from OSA-pool) Non-specific lipid-transfer protein 1, LTP 1 Not determined. Not determined. Ph.D.-12 phage display library (X12) The target was purified from pooled sera of 14 peach allergic patients showing only oral allergy syndrome. Twenty clones were Sequenced; 9 different peptides were rendered. 507 LTRGSPVTGPFA SLGAAQVVLPRT NTDSALRLPPFY SLTPLLFNYDVA FHAEWPTPSPWP NDDLMATRHGLA KSNDLGSAPLQH TDHSMGQRVQPS RWWQHRPSHTPS HNTVPSLWYHNR QLSGMLEWQNLR TPTGVHIAPVQT TSRPALLNDQGH 12 Phage display (common panning) 3 PMID:18242709 Anti-Pru p 3 polyclonal antibody IgE (from SYS-pool) Non-specific lipid-transfer protein 1, LTP 1 Not determined. Not determined. Ph.D.-12 phage display library (X12) The target was purified from pooled sera of 9 peach allergic patients with, at least, one systemic reaction, with or without associated oral allergy syndrome. Twenty clones were Sequenced; 12 distinct peptides were rendered. 508 CFRHMTEQC(6) CIPLPFYNC(5) CSHLYLHNC(2) CPLTGTSKC(1) CTLKVRGEC(1) CGFWHTSKC(1) CAWPSKDNC(1) CIPLLFHNC(1) CWGAMVHPC(1) CHASLKHRC(1) CYTPWMPRC(1) CTYLARKGC(1) 12 Phage display (common panning) 4 PMID:19027791 Beta-amyloid protein 42 Not determined. Not determined. Not determined. Ph.D.-C7C phage display library (CX7C) Seventy-two clones were isolated arbitrarily from the output of the fourth round of panning. Their individual affinities were evaluated and 22 clones showed 3–7 times higher affinity for Aβ42 as compared to that for BSA were sequenced and 12 peptide inserts were identified. The Kd of candidate phage clones for binding to Aβ42 are in the picomolar range. The specific interaction with amyloid plaques was validated by immunohistochemistry on brain sections. 509 SVSLPYANLATH(11) FRTKPDAQGDTS(1) NHNDFRPMYTWR(1) HYDFSIKETSLQ(1) PTATHRPLATVF(1) 5 Phage display (common panning) 3 PMID:18241959 Anti-catalase monoclonal antibody C001 Catalase Not determined. Not determined. Ph.D.-12 phage display library (X12) Among 34 clones randomly selected, 31 clones were positively recognized by mAb C001 while BSA was used as negative control. Fifteen positive clones were sequenced and 5 unique peptides were indentified. One mimotope (SVSLPYANLATH) showed good match with Catalase protein at 394—405aa and the serum of mice induced by the phage clone clearly recognized Catalase protein. 510 TLSYKLYRHSLL(2) SVEKLVRAGQVS(1) VETKLTRETVWT(1) PVSKLSRASGVG(1) FHARLQRLPPHR(1) FHAYSKLTKSLL(1) SWYKLVHGDAQA(1) SPLKLSRSSMYV(1) TPNKLKKPPVPQ(1) WTQRLVKGAEVG(1) DTERLYRAGQEV(1) K-L-x-R 11 Phage display (common panning) 3 PMID:17978885 Anti-nucleoprotein monoclonal antibody N1H5 Nucleoprotein Not determined. Not determined. Ph.D.-12 phage display library (X12) 511 NMFKKEMALSLD(2) RTTDFKREMSTS(1) VPLTFKHEMSLA(1) VLPTFKREMTLV(1) WLSGFKRDMVSS(1) GYAPFKREMFQN(1) PVLVFHREMSLG(1) NHWKMEMSLPSS(1) DYNRFHREYVVS(1) FNPWQWEMTFPT(1) FKREM 10 Phage display (common panning) 3 PMID:17978885 Anti-nucleoprotein monoclonal antibody N4E2 Nucleoprotein Not determined. Not determined. Ph.D.-12 phage display library (X12) 512 AKAPLDLPVDGF(2) FRASTDYPVFGF(1) STITDKPVPGFG(1) STISDKPVPGFG(1) HDSFWTHPVPGA(1) D-x-P-V-x-G-F 5 Phage display (common panning) 3 PMID:17978885 Anti-nucleoprotein monoclonal antibody H2F5 Nucleoprotein, Protein N Not determined. Not determined. Ph.D.-12 phage display library (X12) 513 SNFTTQMTFYTG(3) VHNSHASWRYTG(1) VQDNTGLLHYTG(1) TQLMWPNLIYTG(1) ASFELHQWYTAT(1) FTSSNVPLRYTG(1) SVTTLPAQLYTG(1) YTG 7 Phage display (common panning) 3 PMID:17978885 Anti-nucleoprotein monoclonal antibody H3G5 Nucleoprotein, Protein N Not determined. Not determined. Ph.D.-12 phage display library (X12) 514 MNLHDYHRLFWY QHPQINQTLYRM WWRPLTPESPPA 3 Phage display (common panning) 3 PMID:18359289 Enterotoxin type B Not determined. Not determined. Not determined. Ph.D.-12 phage display library (X12) Among 38 phage clones selected, 16 were positive. Phage clone number 24, 9, and 6 with higher SEB-binding affinity were sequenced. 515 CLSYYPSYC(14) CSSYYPSYC(2) CEQWYPSYC(1) CQHPHKPGC(1) CLEIQPPHC(1) CGAGGSLYC(1) CHPNGDKLC(1) CPNSSLQQC(1) CYTQPLSTC(1) CHLPCSHRC(1) CRHGPTAEC(1) CKNMPPWYC(1) CPTPWMARC(1) CATKTPRTC(1) YYPSY 14 Phage display (subtractive panning) 4 PMID:18363834 L-alpha-phosphatidylserine Not determined. Not determined. Not determined. Ph.D.-C7C phage display library (CX7C) L-α-phosphatidylcholine (PC) coated and BSA blocked ELISA plates were used to remove non-specific phages. 516 EYWYCGMNRTGC(6) QIWYERTLPFTF(1) 2 Phage display (common panning) 3 PMID:18481004 Anti-blood group A antigen monclonal antibody NaM87-1F6 Blood group A antigen Not determined. Not determined. Ph.D.-12 phage display library (X12) 517 WPMNDDSTRPR(1) DSMNTDTSTRPR(1) FQTDMSTRPRGA(1) YTYTDYSTRPHY(1) DPTDYSTRPHMW(1) PQTDGSTRPRGL(1) DFRYSTRPFAL(1) QRYYSTRPRAL(1) MISYSTRPDRQ(1) VQTDGSTKSHRH(1) IRTDESTKRLPP(1) TLSTDQSTTRNW(1) DIDYSDYSTR(1) DDHSTRCWVS(1) YPLHLNTDYSTR(1) T-D-x-S-T-R-P 15 Phage display (common panning) 4 PMID:19741295 Anti-HSP90 monoclonal antibody AC88 Heat shock protein HSP90 Not determined. Not determined. Ph.D.-12 phage display library (X12) 518 WPMNDDSTRR(5) YTYTDYSTRPHY(3) FSTDWSTRPRLV(1) DSMNTDDSTRPR(1) DFRDYSTRPFAL(1) MISDYSTRPDRR(1) WTRDNSTRPIVR(1) TDSDYSTRPSRG(1) TYQDFSTRPRSF(1) AESDDSSTRRH(1) QFTGSTRQHAG(1) WNTDFSTRAAHT(1) AYKLPQTDDST(1) T-D-x-S-T-R-P 13 Phage display (common panning) 5 PMID:19741295 Anti-HSP90 monoclonal antibody AC88 Heat shock protein HSP90 Not determined. Not determined. Ph.D.-12 phage display library (X12) 519 FPSHYWLYPPPT(7) NYKSPLFAVPMT(6) DLNTNRTQMVLH(4) KIVMFWHEPVYA(4) 4 Phage display (common panning) 4 PMID:19741295 Anti-DnaK monoclonal antibody 8E2/2 Heat shock protein DnaK Not determined. Not determined. Ph.D.-12 phage display library (X12) 520 FPSHYWLYPPPT(11) NYKSPLFAVPMT(5) DLNTNRTQMVLH(3) 3 Phage display (common panning) 5 PMID:19741295 Anti-DnaK monoclonal antibody 8E2/2 Heat shock protein DnaK Not determined. Not determined. Ph.D.-12 phage display library (X12) 521 TISNRDYIRPMD(3) FPSHYWLYPPPT(2) SQMPEYLLKADN(1) WPMNTDDSTRPR(1) YTYTDYSTRPHY(1) PQTDGSTRPRGL(1) TLSQDQSETLNY(1) PHPSTMFDRQED(1) TSPHKTTLDLNA(1) DNHSPVNIAHKL(1) SRLPLSQPSPNS(1) 11 Phage display (common panning) 4 PMID:19741295 Pooled typhoid patients' sera (TPS) Not determined. Not determined. Not determined. Ph.D.-12 phage display library (X12) 522 TISNRDYIRPMD(6) SQMPEYLLKADN(3) WPMNTDDSTRPR(1) YTYTDYSTRPHY(1) PQTDGSTRPRGL(1) DPTDYSTRPHMW(1) 6 Phage display (common panning) 5 PMID:19741295 Pooled typhoid patients' sera (TPS) Not determined. Not determined. Not determined. Ph.D.-12 phage display library (X12) 523 VTWTPQAWFQWV(4) MTTLSDSPVRPR(2) LTSQEMAARTLG(1) VAPFWVASLPAP(1) YTKPMGLTFPS(1) FSAHAHL(1) 3 Phage display (subtractive panning) 4 PMID:18632177 U87MG glioblastoma cell line Not determined. Not determined. Not determined. Ph.D.-12 phage display library (X12) Phage clones expressing VTWTPQAWFQWV bound to U87MG cells 700-fold more efficiently than the original unselected library. They bound strongly to other human glioma cell lines, including H4, SW1088 and SW1783, but very weakly to normal human astrocytes and SV40-immortalized human astroglial cells. When compared to other non-glial tumor cells, the phage showed 400- to 1400-fold higher binding efficiency for U87MG cells. 524 YTRISNDHHCDTTICHINST(3) NDSNCTDTLCYVYPLHSNPG(2) VKDALHHVDHTCSTFLCALP(2) DTHFCDDNYCPLPHSSGAIA(2) SCNDYVCLTPHPKTPLYEKQ(1) NVNCNASVCTIPDRLITDNP(1) SSYCNNSLCLVPSYPDHSNT(1) HCNAHLCNLPDGSPSSISSH(1) NIHHCNHIYCTIPSHS(1) IHSYSYASDNMCTDTVCFIH(1) CSDTYCTIPTYGRDRDVRRD(1) DSYFCDNFLCRLDHNRNSRN(1) HNISCDKSLCMLRESAPTTV(1) NSSGSCDHFLCIIPTSNTHT(1) HYSSASHANNVCDAHYCLLP(1) AFCDISFCHLNDRIIIIITN(1) GLDPYHRFCDDNVCSIRPFN(1) DSSDDRHTCGHHICHLYPFS(1) HPPSHYCDIHSRLCHPNAPD(1) C-[DNSTG]-D-[ST]-x-C-x(2)-P 19 Phage display (common panning) 3 PMID:18672101 Thioredoxin-1, Trx-1 Not determined. Not determined. Not determined. ANL 22 phage display library Biotinylated thioredoxin-1 imobilized with streptavidin-coated magnetic beads were used as target. After three rounds of affinity selection, 96 phage clones were screened using a phage enzyme-linked immunosorbent assay (ELISA). A total of 24 phage clones bound specifically to E. coli Trx. 525 YVYRWVEAECVA YVYEGRSRVRRP WHVPRTWWVLPP NTLSGQYFWRMP REPIYHKLHRLT FSPAYLRDAALK YIDHIVLTIYLE 7 Phage display (common panning) 3 PMID:18812010 Anti-cathepsin L1/L2 IgG Cathepsin L1, Cathepsin L2 Not determined. Not determined. Ph.D.-12 phage display library (X12) YVYRWVEAECVA and FSPAYLRDAALK bearing phages had been successfully used in vaccination.