226 CPPPKKGNC(1) LTPCDT(1) CKSKKSSAC(1) CERILWVVC(1) CNIRNAYTC(1) LTPCDRNTMVIC(1) LTPCDPNTSNFC(1) CCTNILVVC(1) 8 Phage display (common panning) 4 PMID:16581206 Anti-leptospira monoclonal antibody P9 (4A2D5D6) Leptospira Not determined. Not determined. CX7C T7 phage display library 227 CTKKKSSSC(1) CRKKISTIC(1) CRKKNPSNC(1) LTPCDKKYYGCC(1) LTPCDTNTYYCC(1) CRPNKKNAC(1) LTPCDT(1) TPCSPKKKGSC(1) CRKS(1) CCDSKYYLRC(1) 10 Phage display (common panning) 4 PMID:16581206 Anti-leptospira monoclonal antibody P10 (1A4B10E1) Leptospira Not determined. Not determined. CX7C T7 phage display library 228 TPCSTIYNDDC(3) CNNIYNDDC(3) CRTITNDKC(1) CPSIYNDDC(1) CTKKGPRNC(1) LTPCDTRDLVVC(1) 6 Phage display (common panning) 4 PMID:16581206 Anti-leptospira monoclonal antibody P17 (8C1E11) Leptospira Not determined. Not determined. CX7C T7 phage display library 229 CFNSTNDPC(2) CFNATNDPC(2) CPKSKSSRC(1) CTPKKNRAC(1) TPCSKKRSISC(1) CLTPLNDPC(1) 6 Phage display (common panning) 4 PMID:16581206 Anti-leptospira monoclonal antibody F11 (9B4C1D8) Leptospira Not determined. Not determined. CX7C T7 phage display library 230 TPCSTLINIFC(3) CFK(2) CRTKKTGSC(1) 3 Phage display (common panning) 4 PMID:16581206 Anti-leptospira monoclonal antibody F20 (9A4G1A8) Leptospira Not determined. Not determined. CX7C T7 phage display library 231 TPCSPKRKANC(1) 1 Phage display (common panning) 4 PMID:16581206 Anti-leptospira monoclonal antibody F21 (9A5A11A11) Leptospira Not determined. Not determined. CX7C T7 phage display library 232 LTPCDNY(5) 1 Phage display (common panning) 4 PMID:16581206 Anti-leptospira monoclonal antibody LD5 Leptospira Not determined. Not determined. CX7C T7 phage display library 233 CVLKKNRPC(3) CLP(2) 2 Phage display (common panning) 4 PMID:16581206 Anti-leptospira monoclonal antibody LF9 Leptospira Not determined. Not determined. CX7C T7 phage display library 234 LTPCDAERSGYC(1) LTPCDAPTFGSC(1) LTPCDPHFLDDC(1) LTPCDLRTSGYC(1) CRSKRIRNC(1) TPCILLSIGFC(1) CTTKRTPRC(1) LTPCDLRPFWFC(1) CRNSKSPNC(1) 9 Phage display (common panning) 4 PMID:16581206 Anti-leptospira monoclonal antibody P20 (7A5F12) Leptospira Not determined. Not determined. CX7C T7 phage display library 235 CVLSRSRSC(1) CRIK(1) CRTK(1) LTPCDLRRLGYC(1) TPCSSKRSTSC(1) TPCSPKASRSC(1) TPCI(1) LTPCDLRSLGYC(1) 8 Phage display (common panning) 4 PMID:16581206 Anti-leptospira polyclonal antibody 1 Leptospira Not determined. Not determined. CX7C T7 phage display library 236 TPCSKK(1) CRNPQHTNC(1) CVTNNTPDC(1) LTPCDLRRSGYC(1) CTTKKNVTC(1) CFNPLNDNC(1) CAPNSNRRC(1) LTPCDTKKFGYC(1) 8 Phage display (common panning) 4 PMID:16581206 Anti-leptospira polyclonal antibody 2 Leptospira Not determined. Not determined. CX7C T7 phage display library 237 TPCSTKRSASC(2) CVPKKKGNC(1) CPYPIITFC(1) CKTKRSASC(1) CGSSRLAIC(1) LTPCDNN(1) CLNPLKVYC(1) CASSSIVDC(1) 8 Phage display (common panning) 4 PMID:16581206 Anti-leptospira polyclonal antibody 3 Leptospira Not determined. Not determined. CX7C T7 phage display library 238 TPCILSGSASC(1) TPCSNKSKRNC(1) TPCSLTVTTIC(1) CRKKNLGNC(1) PCNTKRSASC(1) CTL(1) CKTKRSASC(1) CRSKNPANC(1) PCNTKRTASC(1) 9 Phage display (common panning) 4 PMID:16581206 Anti-leptospira polyclonal antibody 4 Leptospira Not determined. Not determined. CX7C T7 phage display library 239 WEADDKNQHGEG ISLTEWSMWYRH EEGPWSTHVGRT WGNEGGDHLQPV SLKIRWELKMYQE AVERWEKHTWSE 6 Phage display (common panning) PMID:17446277 Anti-ManLAM monoclonal antibody CS40 ManLAM Not determined. Not determined. X12 phage display library 240 GGSGTSRTPILG(7) AVGLSPDGSRGV(2) TLPIISTSLMRH(2) GHFSYPYARQTP(1) QLCIFHNEWNPV(1) SHLVYLTRHCVD(1) 6 Phage display (common panning) 3 PMID:16359760 Anti-RAPs polyclonal antibody 50S ribosomal protein L2 Not determined. Not determined. Ph.D.-12 phage display library (X12) 241 FVDILFAGMSGA(7) MHNPSMT(4) MHSPLPI(2) FVEIYSP(1) FVEHTRW(1) FVLPWRI(1) MHTPAIG(1) MHLNTPP(1) FIDWQSR(1) FIEVPWK(1) MHSPAAT(1) MHTPNSR(1) MHLNTAS(1) MHSPSNA(1) MHLTQSP(1) MHLTTNI(1) FVLVLFAGMSGA(1) 17 Phage display (common panning) 3 PMID:16360019 Anti-PDC-E2 polyclonal antibody Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial Not determined. Not determined. Ph.D.-12, Ph.D.-7 and Ph.D.-C7C phage display library pool Two independent biopannings were performed using the PhD-7 random heptapeptide library (New England Biolabs, Beverly, MA) and IgG from two PBC sera, and three independent biopannings using a mixture of libraries comprising the PhD-7 library, a cysteineconstrained heptapeptide library PhD-C7C, and a 12mer library PhD-12 (New England Biolabs, MA, USA), and IgG from a further three PBC sera. Thus, in all, phage clones were available from five separate biopannings with sera from five patients. 242 QDKLTQWPKWLE(8) NMSIQWHRDFNK(4) HEENDLRWWFIH(2) DDNTKQWPSWLE(2) DRAQLTWPAWLE(2) SPYQYSWPTWLE(1) STNMGAWPWWLE(1) 7 Phage display (common panning) 3 PMID:16814270 Anti-CD20 monoclonal antibody rituximab B-lymphocyte antigen CD20 2OSL, Not determined. Ph.D.-12 phage display library (X12) 243 WHWTWLSEYPPP(3) GGPIPTIPRPTL(2) WHWTWLSDYPPP(1) WQWTWLCEHPPP(1) WHRPPWWPSSSL(1) HELRSQIISTTS(1) FQWSWYTPPRPS(1) 7 Phage display (common panning) 3 PMID:16713681 Anti-Gb3 polyclonal antibody Globotriaosylceramide (Gb3Cer) Not determined. Not determined. Ph.D.-12 phage display library (X12) 244 WHWTWLSEYPPP(3) EQWPWSLLPIHY(2) NALTSHTASPAP(1) HPPGHRLTLIPH(1) VPSLHQTTHPTP(1) HPSCNSATGIPH(1) 6 Phage display (common panning) 4 PMID:16713681 Anti-Gb3 polyclonal antibody Globotriaosylceramide (Gb3Cer) Not determined. Not determined. Ph.D.-12 phage display library (X12) 245 KHMQNPF(7) GHMSNPF(3) SHLANPF(2) SHLSNPF(2) DHLRNPF(1) FHQPNPF(1) LHLRNPF(1) KHLINPF(1) QHLQNPF(1) SHNPNPF(1) THLTNPF(1) QHLLNPF(1) WHNSNPF(1) KHLSDPF(1) H-x(2)-[ND]-P-F 14 Phage display (common panning) 3 PMID:16904109 Recombinant protein N36(L8)C34 Not determined. Not determined. Not determined. Ph.D.-7 phage display library (X7) 246 NHLHNPFTVDSG(1) SHLHNPFAFPAQ(1) DHTTNPFGTPLP(1) SHTENPFTVPQQ(1) FHLDNPFLADRS(1) AHTTDPFQPWAL(1) SHLSDPFGELRP(1) GHNQFNPFTFVM(1) GHNHVLNPFKVY(1) H-x(2)-[ND]-P-F 9 Phage display (common panning) 3 PMID:16904109 Recombinant protein N36(L8)C34 Not determined. Not determined. Not determined. Ph.D.-12 phage display library (X12) 247 SNWKWWPGIFD HWWRSWYSDSV HEWHWWHQEAA WGLEHFAGNKR WWRWNWATPVD WHNYFHWWQDT 6 Phage display (common panning) 4 PMID:17046401 Polyglutamine containing 62 consecutive glutamines Not determined. Not determined. Not determined. X5-Fixed-X5 phage display library 248 CIPSHTPRC(4) CHPQYHARC(1) CGPMGISTC(1) CSGPLQRSC(1) CYSAPVSAC(1) CQATPHPXC(1) CNKERPWVC(1) 7 Phage display (common panning) 3 PMID:16517013 UDP-N-acetylmuramoylalanine--D-glutamate ligase ATP, D-glutamate Not determined. Not determined. Ph.D.-C7C phage display library (CX7C) Phage encoding peptides were eluted in the each round of biopanning using glycine-HCl. 249 HLPTSSLFDTTH(2) NPHWSSLYAPRN(2) TSYIPSFPATKY(1) ERPQPLDPQTFN(1) DAKNSNSRILDQ(1) DHQRMNDAMLVL(1) HVTTTFAPPPPR(1) 7 Phage display (common panning) 3 PMID:16517013 UDP-N-acetylmuramoylalanine--D-glutamate ligase ATP, D-glutamate Not determined. Not determined. Ph.D.-12 phage display library (X12) Phage encoding peptides were eluted in the each round of biopanning using glycine-HCl. 250 CIPSHTPRC(1) CHPQYHARC(1) CTPHLPLRC(1) CSPTLRTIC(1) CNTSSSPRC(1) CPHKNNSTC(1) CPMLDNHKC(1) CNQRLTGEC(1) CSFRLSLHC(1) CYSAPVSAC(1) 10 Phage display (competitive panning) 3 PMID:16517013 UDP-N-acetylmuramoylalanine--D-glutamate ligase ATP Not determined. Not determined. Ph.D.-C7C phage display library (CX7C) Phage encoding peptides were eluted in the each round of biopanning using glycine-HCl, glycine-HCl and ATP.